Tutorials

The following tutorials are available either as html or interactive jupyter notebooks.

• Methane: Compounds and bonds
• Ethane: Reading from files, Ports and coordinate transforms
• Monolayer: Complex hierarchies, patterns, tiling and writing to files
• Point Particles: Basic system initialization
• Building a Simple Alkane
  • Setting up the monomer
  • Defining the polymerization class
  • Using mBuild’s Polymer Class
  • Building a System of Alkanes
  • Variations